BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H12LP1|AL426759
(709 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1002 1289 0.0
>3x_Contig1002
Length = 4066
Score = 1289 bits (646), Expect = 0.0
Identities = 688/706 (97%)
Strand = Plus / Minus
Query: 4 gctagtagaagaaaaggcctgttacataccgtgcgttgaaatgcttataactttgaaaca 63
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3117 gctagtagaataaacggcctgttacataccgtgcgttgaaatgcttataactttgaaaca 3058
Query: 64 gcctttctctagtcaaatttaaatagctaagggttttctgttggattgatagttcgaagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3057 gcctttctctagtcaaatttaaatagctaagggttttctgttggattgatagttcgaagt 2998
Query: 124 gagaatgttaatgaatctttcctggataagaaaagaattctcgaattcagaatgatagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2997 gagaatgttaatgaatctttcctggataagaaaagaattctcgaattcagaatgatagaa 2938
Query: 184 taatgtatttdattgatttcgataaaataaatgaaacgtaaagagaatacgtgaaatgat 243
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2937 taatgtatttaattgatttcgataaaataaatgaaacgtaaagagaatacgtgaaatgat 2878
Query: 244 tctcaaatttaaataagtgtccgtttataaatcattaatttttggctttggatattgttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2877 tctcaaatttaaataagtgtccgtttataaatcattaatttttggctttggatattgttt 2818
Query: 304 gtgtaaatttttggattcaatttttttaaaacttgatgttgatactaagaagtcctattt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817 gtgtaaatttttggattcaatttttttaaaacttgatgttgatactaagaagtcctattt 2758
Query: 364 catagggttcaaattcaaatgtttggtatgatttttattcttaattgtgaattaatttaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2757 catagggttcaaattcaaatgtttggtatgatttttattcttaattgtgaattaatttaa 2698
Query: 424 tggtgatagaaggatatgttattcttcgttaataaaataatattaaataaattcgattct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2697 tggtgatagaaggatatgttattcttcgttaataaaataatattaaataaattcgattct 2638
Query: 484 ctaacgtgtggtggttctcaaaatcacggcgaaaggacaagtttaggcttccgaagaaag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2637 ctaacgtgtggtggttctcaaaatcacggcgaaaggacaagtttaggcttccgaagaaag 2578
Query: 544 ctcttgttttgcaatttcaacaaaacgcaaaamaacccgcaamccattcaaaaagttgga 603
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 2577 ctcttgttttgcaatttcaacaaaacgcaaaaaaacccgcaacccattcaaaaagttgga 2518
Query: 604 aatagaaagagtttgaaattataatatataatsaasgtgagtatagaatgtgtgtatttt 663
||||||||||||||||| || | ||||| || || |||||||| || ||||||| ||||
Sbjct: 2517 aatagaaagagtttgaacttctcctatatcatgaaggtgagtatcgactgtgtgtctttt 2458
Query: 664 ttttgttattgttgtttgtagagaatagaaataaaatgratagaag 709
||||||| ||||||||||||||||||||||||||| || |||||||
Sbjct: 2457 ttttgttcttgttgtttgtagagaatagaaataaactgaatagaag 2412
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8316
Number of Sequences: 1807
Number of extensions: 8316
Number of successful extensions: 232
Number of sequences better than 1.0e-20: 1
length of query: 709
length of database: 10,358,551
effective HSP length: 16
effective length of query: 693
effective length of database: 10,329,639
effective search space: 7158439827
effective search space used: 7158439827
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)